API Reference#

Service Layer#

metakb.services.search

Provide search services.

Repository#

`metakb.repository.base`	Declare base repository interface + associated helper functions.
`metakb.repository.neo4j_repository`	Neo4j implementation of the repository abstraction.
`metakb.repository.neo4j_models`	Define data structures for loading objects into DB.
`metakb.repository.queries.catalog`	Provide access to static Neo4j queries.

Data Schemas#

`metakb.schemas.api`	Create schemas for API
`metakb.schemas.app`	Module containing app schemas and enums

Harvesters#

`metakb.harvesters.base`	A module for the Harvester base class
`metakb.harvesters.civic`	A module for the CIViC harvester.
`metakb.harvesters.moa`	A module for the Molecular Oncology Almanac harvester

Transformers#

`metakb.transformers.base`	A module for the Transformer base class.
`metakb.transformers.civic`	A module for to transform CIViC.
`metakb.transformers.moa`	A module to convert MOA resources to common data model

Misc#

`metakb.normalizers`	Handle construction of and relay requests to VICC normalizer services.
`metakb.config`	Read and provide runtime configuration.